Author

Rogene M. Eichler West

Pacific Northwest National Laboratory

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Neuroscience· 1

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Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Assay:imaging· 1 Organism:mouse· 1 Research Focus:spatial domain detection· 1 Approach:transformer / foundation model· 1

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Bobbie‐Jo Webb‐RobertsoniD· 1 shared Kasey Bowyer· 1 shared Lisa BrameriD· 1 shared Marjolein T. OostromiD· 1 shared Michael A. MuniakiD· 1 shared Moses Y. ObiriiD· 1 shared Paritosh PandeiD· 1 shared Sarah M. AkersiD· 1 shared

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1 shared paperNeuroscience

Bobbie‐Jo Webb‐RobertsonORCID

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1 paper

Recent·Most cited

NeurosciencePLoS ONEPeer-reviewedMar 29, 2024

Fine-tuning TrailMap: The utility of transfer learning to improve the performance of deep learning in axon segmentation of light-sheet microscopy images

Marjolein T. Oostrom, Michael A. Muniak, Rogene M. Eichler West…·Bobbie‐Jo Webb‐Robertson

This paper improves axon segmentation in light-sheet microscopy images by fine-tuning the TrailMap model with expert-labeled data, achieving better recall and adjusted F1-score.

5 citations

mouseimaging

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