Author

Søren B. Hansen

University of Copenhagen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Morten T. LimborgiD· 2 shared Annette BernhardiD· 1 shared Even FjæreiD· 1 shared Harald SveieriD· 1 shared Jacob Agerbo RasmusseniD· 1 shared Jaelle C. BrealeyiD· 1 shared Karsten KristianseniD· 1 shared Kasper D. HanseniD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersGenomics

Morten T. LimborgORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintApr 30, 2025

Sample-specific CpG loci are important for accurate long-read methylation analysis

Søren B. Hansen, Kasper D. Hansen, Morten T. Limborg

The paper introduces a likelihood-based method to identify sample-specific CpG loci in long-read sequencing data, improving accuracy in methylation analysis by reducing reference bias.

DOI 10.1101/2025.04.30.651558

long-read sequencingstatistical model

𝕏 PostBluesky

Systems BiologymSystemsPeer-reviewedJan 31, 2024

Host-gut microbiota interactions shape parasite infections in farmed Atlantic salmon

Jaelle C. Brealey, Miyako Kodama, Jacob Agerbo Rasmussen…·Morten T. Limborg

The paper investigates how host genetics and gut microbiota interact with parasite infections in Atlantic salmon, finding that cestode infections alter microbiota composition and host gene expression.

15 citations

non-human primatebulk RNA-seq

𝕏 PostBluesky