Author

S. Gaiarsa

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 2 Research Focus:clustering· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

C. Bandi· 3 shared D. Sassera· 3 shared F. Baldanti· 2 shared F. Comandatore· 2 shared A. Fortova· 1 shared A. Gales· 1 shared A. M. Floriano· 1 shared A. Piralla· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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3 shared papersEvolutionary Biology

C. Bandi

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

P-DOR, an easy-to-use pipeline to reconstruct outbreaks using pathogen genomics

G. Batisti Biffignandi, G. Bellinzona, G. Petazzoni, D. Sassera, G. V. Zuccotti, C. Bandi, F. Baldanti, F. Comandatore, S. Gaiarsa

P-DOR is a pipeline that uses pathogen genomics to reconstruct outbreaks by analyzing SNP-based phylogenies and metadata, providing a user-friendly tool for epidemiological investigations.

bioRxiv · May 30, 2023 · PreprintMicrobiology

Bispecific antibody neutralizes circulating SARS-CoV-2 variants, prevents escape and protects mice from disease

R. De Gasparo, M. Pedotti, L. Simonelli, P. Nickl, F. Muecksch, I. Cassaniti, E. Percivalle, J. C. C. Lorenzi, F. Mazzola, D. Magri, T. Michalcikova, J. Haviernik, V. Honig, B. Mrazkova, N. Polakova, , T. Hatziioannou

bioRxiv · Jan 22, 2021 · PreprintImmunology

The extracellular association of the bacterium \"Candidatus Deianiraea vastatrix\" with the ciliate Paramecium suggests an alternative scenario for the evolution of Rickettsiales

M. Castelli, E. Sabaneyeva, O. Lanzoni, N. Lebedeva, A. M. Floriano, S. Gaiarsa, K. Benken, L. Modeo, C. Bandi, A. Potekhin, D. Sassera, G. Petroni

The paper describes a novel Rickettsiales bacterium associated with Paramecium that replicates extracellularly, suggesting an alternative evolutionary scenario for intracellularity in Rickettsiales.

bioRxiv · Nov 27, 2018Evolutionary Biology

Gene composition as a potential barrier to large recombinations in the bacterial pathogen Klebsiella pneumoniae

F. Comandatore, D. Sassera, S. C. Bayliss, E. Scaltriti, S. Gaiarsa, X. Cao, A. Gales, R. Saito, S. Pongolini, S. Brisse, E. Feil, C. Bandi

This study analyzes 834 Klebsiella pneumoniae genomes to investigate the frequency, distribution, and dynamics of large recombination events, finding that gene composition influences the success of such events.

bioRxiv · Jan 28, 2018Evolutionary Biology