Author

S. J. Beckett

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Ecology· 3 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:ecology & biodiversity· 2 Research Focus:host-pathogen & immune response· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

J. S. Weitz· 4 shared A. E. White· 2 shared D. Muratore· 2 shared D. R. Mende· 2 shared E. V. Armbrust· 2 shared J. R. Casey· 2 shared K. W. Becker· 2 shared R. A. Rodriguez-Gonzalez· 2 shared

Activity by Year

2016-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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4 shared papersEcology

J. S. Weitz

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Author profile →

4 papers

Recent·Most cited

Disentangling top-down drivers of mortality underlying diel population dynamics of Prochlorococcus in the North Pacific Subtropical Gyre

S. J. Beckett, D. Demory, A. R. Coenen, J. R. Casey, M. Dugenne, C. L. Follett, P. Connell, M. C. G. Carlson, S. K. Hu, S. T. Wilson, D. Muratore, R. A. Rodriguez-Gonzalez, S. Peng, K. W. Becker, D. R. Mende, , J. S. Weitz

The paper develops multitrophic models to investigate top-down and bottom-up drivers of Prochlorococcus population dynamics in the North Pacific Subtropical Gyre, finding grazers are the primary top-down factor despite high viral densities.

bioRxiv · Jun 15, 2021Ecology

Community-scale Synchronization and Temporal Partitioning of Gene Expression, Metabolism, and Lipid Biosynthesis in Oligotrophic Ocean Surface Waters

D. Muratore, A. K. Boysen, M. J. Harke, K. W. Becker, J. R. Casey, S. N. Coesel, D. R. Mende, S. T. Wilson, F. O. Aylward, J. M. Eppley, A. Vislova, S. Peng, R. A. Rodriguez-Gonzalez, S. J. Beckett, E. V. Armbrust, , J. S. Weitz

The paper uses machine learning to analyze time series data from ocean surface waters, revealing synchronized and asynchronous gene expression patterns linked to diel cycles and microbial niche partitioning.

bioRxiv · May 15, 2020 · PreprintEcology

The effect of strain level diversity on robust inference of virus-induced mortality

S. J. Beckett, J. S. Weitz

The paper examines how strain diversity affects the accuracy of virus-induced lysis rate estimates using the modified dilution method in marine microbial communities.

bioRxiv · Mar 7, 2018Microbiology

Disentangling the Relative Strength of Niche Competition from Grazing-Induced Phytoplankton Mortality

S. J. Beckett, J. S. Weitz

The paper shows the dilution method may overestimate zooplankton grazing rates due to niche competition and proposes a modified Z-dilution method to disentangle these effects.

bioRxiv · Aug 30, 2016Ecology