Author

S. Kopf

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:metagenomics· 3 Research Focus:ecology & biodiversity· 2 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Assay:metabolomics· 1 Assay:proteomics· 1 Approach:statistical model· 1

Frequent Co-Authors

J. McFarlin· 2 shared T. A. Caro· 2 shared A. L. Sessions· 1 shared A. Maloney· 1 shared A. Pearson· 1 shared A. S. Kasi· 1 shared A. Templeton· 1 shared A. Zhou· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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2 shared papersMicrobiology

J. McFarlin

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4 papers

Recent·Most cited

Single-cell measurement of microbial growth rate with Raman microspectroscopy

T. A. Caro, S. Kashyap, G. Brown, C. Chen, S. Kopf, A. Templeton

This paper evaluates Raman microspectroscopy as a method to measure microbial growth rates using deuterium incorporation, showing its reliability and comparison with nanoSIMS.

bioRxiv · Dec 16, 2023Microbiology

Metabolic imprints in the hydrogen isotopes of Archaeoglobus fulgidus tetraether lipids

J. H. Rhim, S. Kopf, J. McFarlin, A. Maloney, H. Batther, C. M. Harris, A. Zhou, X. Feng, Y. Weber, S. Hoeft-McCann, A. Pearson, W. D. Leavitt

This study investigates how metabolism and growth conditions affect hydrogen isotope signatures in archaeal lipids, supporting their use as paleohydrological proxies.

bioRxiv · Nov 29, 2023Microbiology

Hydrogen stable isotope probing of lipids demonstrates slow rates of microbial growth in soil

T. A. Caro, J. McFarlin, S. Jech, N. Fierer, S. Kopf

This study measures microbial growth rates in soil using hydrogen stable isotope probing of lipids, finding slow and variable generation times, with lower-biomass soils showing faster growth.

bioRxiv · Jul 11, 2022Microbiology

Refining the application of microbial lipids as tracers of Staphylococcus aureus growth rates in cystic fibrosis sputum

C. Neubauer, A. S. Kasi, N. Grahl, A. L. Sessions, S. Kopf, R. Kato, D. A. Hogan, D. K. Newman

This study refines the use of microbial lipids as growth rate tracers for Staphylococcus aureus in CF sputum by identifying alternative microbial sources of fatty acids and recommending best practices for stable isotope probing.

bioRxiv · Jun 15, 2018Microbiology