Author

Santeri Toivonen

University of Helsinki

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Organism:C. elegans· 1 Organism:Drosophila· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

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Alexandru Ioan TomescuiD· 1 shared Paul MedvedeviD· 1 shared Sebastian SchmidtiD· 1 shared

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2023-2023 · peak 1/yr

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Alexandru Ioan TomescuORCID

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1 paper

Recent·Most cited

The omnitig framework can improve genome assembly contiguity in practice

Sebastian Schmidt, Santeri Toivonen, Paul Medvedev, Alexandru Ioan Tomescu

The paper improves genome assembly contiguity by integrating the omnitig framework into existing assemblers using simplified algorithms, showing better alignment-based contiguity with minimal computational cost.

bioRxiv · Jan 30, 2023 · PreprintBioinformatics