Author

Sanya Arshad

University of Pittsburgh

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Systems Biology· 1

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Organism:mouse· 1 Assay:protein sequence· 1 Research Focus:protein structure prediction· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Akash PateliD· 1 shared Alisa A. OmelchenkoiD· 1 shared Alok V. JoglekariD· 1 shared AnnaElaine RosengartiD· 1 shared David Ryan KoesiD· 1 shared Iliyan Nazarali· 1 shared Jane C SiwekiD· 1 shared Javad RahimikolluiD· 1 shared

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2025-2025 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperSystems Biology

Akash PatelORCID

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1 paper

Recent·Most cited

Sliding Window INteraction Grammar (SWING): a generalized interaction language model for peptide and protein interactions

Jane C Siwek, Alisa A. Omelchenko, Prabal Chhibbar, Sanya Arshad, AnnaElaine Rosengart, Iliyan Nazarali, Akash Patel, Kiran Nazarali, Javad Rahimikollu, Jeremy S. Tilstra, Mark Jay Shlomchik, David Ryan Koes, Alok V. Joglekar, Jishnu Das

SWING is a novel interaction language model that predicts peptide:MHC interactions and protein-protein interaction disruptions using sequence data.

Nature Methods · Jul 28, 2025Peer-reviewedSystems Biology