Author

Sara Lopez Ruiz De Vargas

Max Planck Institute for Molecular Genetics

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Bioinformatics· 1

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Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1

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Igor UlitskyiD· 1 shared Martin VingroniD· 1 shared Persia Akbari OmgbaiD· 1 shared Trisevgeni RapakouliaiD· 1 shared Verena Laupert· 1 shared

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2023-2023 · peak 1/yr

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1 shared paperBioinformatics

Igor UlitskyORCID

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Recent·Most cited

BioinformaticsBioinformaticsPeer-reviewedNov 1, 2023

CENTRE: A gradient boosting algorithm for Cell-type-specific ENhancer-Target pREdiction

Trisevgeni Rapakoulia, Sara Lopez Ruiz De Vargas, Persia Akbari Omgba…·Martin Vingron

CENTRE predicts cell-type-specific enhancer-target interactions using gene expression and ChIP-seq data, outperforming methods requiring extensive experimental data.

6 citations

ChIP-seqbulk RNA-seq

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