Author

Sarah L Faherty O’Donnell

University College Dublin

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:GWAS / association mapping· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1

Frequent Co-Authors

Carolina N. CorreiaiD· 2 shared David Evan MacHughiD· 2 shared Eamonn P. GormleyiD· 2 shared Emily L. ClarkiD· 2 shared Gillian P. McHugoiD· 2 shared Hubert PauschiD· 2 shared Isobel Claire GormleyiD· 2 shared James G. D. PrendergastiD· 2 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Carolina N. CorreiaORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintSep 1, 2025

A new diagnostic modality for bovine tuberculosis: accurate and robust classification of infected cattle using transcriptomics and machine learning

John Francis O'Grady, Adriana Ivich, Gillian P. McHugo…·David Evan MacHugh

The paper develops mRNA-based classifiers using RNA-seq and machine learning to accurately distinguish bTB-positive from bTB-negative cattle and other pathogens.

DOI 10.1101/2025.09.01.673540

bulk RNA-seqmachine learning (classical)

𝕏 PostBluesky

GenomicsCommunications BiologyPeer-reviewedMar 24, 2025

Integrative genomics sheds light on the immunobiology of tuberculosis in cattle

John Francis O'Grady, Gillian P. McHugo, James A. Ward…·David Evan MacHugh

This study integrates transcriptomic, genomic, and GWAS data to identify genes and eQTLs associated with the PB transcriptome response to M. bovis infection in cattle.

10 citationstop 2%

bulk RNA-seqstatistical model

𝕏 PostBluesky