Author

Sergio Pietro Ferrante

University of California, Riverside

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Organism:plant (other)· 2 Research Focus:variant calling· 2 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Organism:human· 1

Frequent Co-Authors

Han QuiD· 3 shared Mikeal L. RooseiD· 3 shared Zhenyu JiaiD· 3 shared Jianguo ZhuiD· 2 shared John M. ChateriD· 2 shared Ruidong LiiD· 2 shared Ryan C. TrabandiD· 2 shared Shibo WangiD· 2 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersBioinformatics

Han QuORCID

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Author profile →

3 papers

Recent·Most cited

Phasing of the 'Wonderful' Pomegranate Genome Using Haploid DNA Extracted from Pollen Grains

Giuseppe Lana, Ryan C. Traband, Sergio Pietro Ferrante, Mariano Resendiz, Lei Yu, Han Qu, Ethan Eurmsirilerd, Zhanao Deng, Mikeal L. Roose, Donald J. Merhaut, Taylor R Beaulieu, Danelle K. Seymour, Frederick Gmitter, Zhenyu Jia, John M. Chater

The paper presents a haplotype-resolved genome assembly of the pomegranate cultivar 'Wonderful' using DNA from haploid pollen grains and long-read sequencing technologies.

bioRxiv · Jul 18, 2026 · PreprintGenomics

IIIandMe: An Algorithm for Chromosome-scale Haplotype Determination Using Genome-wide Variants of Three Haploid Reproductive Cells

Han Qu, Ruidong Li, Lei Yu, Wei‐Ming Chen, Yuanfa Feng, Qiong Jia, Ryan C. Traband, Xuesong Wang, Shibo Wang, Luoxian He, Zixian Wang, Meng Qu, Sergio Pietro Ferrante, Jianguo Zhu, Weide Zhong, , Zhenyu Jia

IIIandMe improves haplotype phasing accuracy using three gametes, validated through simulation and citrus data.

bioRxiv · Dec 7, 2022 · PreprintBioinformatics

Inference of Chromosome-length Haplotypes Using Genomic Data of Three to Five Single Gametes

Ruidong Li, Han Qu, Jinfeng Chen, Shibo Wang, John M. Chater, Le Zhang, Julong Wei, Yuan‐Ming Zhang, Chenwu Xu, Weide Zhong, Jianguo Zhu, Jianming Lü, Yuanfa Feng, Weiming Chen, Renyuan Ma, , Zhenyu Jia

Hapi infers chromosome-length haplotypes from 3-5 gametes, outperforming existing methods in accuracy, reliability, and cost efficiency.

Molecular Biology and Evolution · Jul 9, 2020Peer-reviewedBioinformatics