Phenotype-Guided In Silico Molecular Generation Using Large Language Models
Qun Jiang, Xing Ye, Zekun Guo, Yingce Xia, Zequn Liu, Jiaying Xu, Peiran Jin, Fusong Ju, Huanhuan Xia, Shangya Feng, Rui Jiang, Haiguang Liu, Tao Qin, Pan Deng, Sida Shao
GEMGen generates small molecules from transcriptomic data to phenocopy gene knockdown effects and identify novel inhibitors.
bioRxiv · Jan 5, 2026 · PreprintCell Biology