Author

Shannelle Reilly

Brown University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Organism:mouse· 1 Assay:multiome· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Alexander V. ChervonskyiD· 1 shared Ananda W. GoldrathiD· 1 shared André Luiz Zorzetto-FernandesiD· 1 shared Andrea Lebron Figueroa· 1 shared Anna-Maria GlobigiD· 1 shared Antoine FreuchetiD· 1 shared Bana JabrìiD· 1 shared Can ErgeniD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperImmunology

Alexander V. ChervonskyORCID

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1 paper

Recent·Most cited

immgenT: A Comprehensive Reference of Convergent T-cell States in the Mouse

Ian Magill, Odhran Casey, Dania Mallah, Siba Smarak Panigrahi, Leon Lee Zhou, Olga Barreiro del Río, Derek J. Bangs, Gavyn Chern Wei Bee, Samantha M. Borys, Josh Choi, Can Ergen, Enxhi Ferraj, Maurizio Fiusco, Antoine Freuchet, Giovanni Galletti, , the immgenT project

immgenT creates a comprehensive T-cell molecular atlas across mouse organs and disease states, identifying 8 lineages and 107 clusters using deep generative models and integrating external datasets.

bioRxiv · Sep 2, 2026 · PreprintImmunology