Author

Shi-Jia Le

Sun Yat-sen University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Approach:experimental assay· 2 Organism:mouse· 2 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:ecology & biodiversity· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

Edward Charles HolmesiD· 3 shared Mǎng ShīiD· 3 shared Peibo ShiiD· 3 shared Wei-Chen WuiD· 3 shared Da-Xi Wang· 2 shared Gen-Yang XiniD· 2 shared Jing Wang· 2 shared Minwu Peng· 2 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersMicrobiology

Edward Charles HolmesORCID

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Author profile →

3 papers

Recent·Most cited

Multi-kingdom microbial diversity and interaction landscapes in mosquitoes revealed by 5,163 individual meta-transcriptomes

Qinyu Gou, Wei-Chen Wu, Peibo Shi, Geng-Yan Luo, Yuanfei Pan, Jing Wang, Yan Gao, Kai-jie Liu, Hai-Long Zhao, Yun Feng, Kun Li, Weihong Yang, De Wu, Shi-Jia Le, Gen-Yang Xin, , Da-Xi Wang

The paper analyzes 5,163 mosquito meta-transcriptomes to characterize microbial diversity and interactions, identifying pathogens and cross-kingdom associations.

bioRxiv · Sep 3, 2026 · PreprintMicrobiology

Infectome Analysis of Small Mammals in Southern China Reveals Ecological Associations and Emerging Threats from Diverse Pathogens

Gen-Yang Xin, Daxi Wang, Xin Zhang, Qingquan Cen, Minwu Peng, Yuqi Liao, Jing Wang, Shi-Jia Le, Jinxia Cheng, Wei-Chen Wu, Xin Hou, Gengyan Luo, Qinyu Gou, Jianbin Kong, Zhu Pan, , Mǎng Shī

The paper analyzes the pathogen infectome of small mammals in southern China, identifying new pathogens and factors influencing their distribution and diversity.

bioRxiv · Feb 9, 2025 · PreprintMicrobiology

Comprehensive Infectome Analysis Reveals Diverse Infectious Agents with Zoonotic Potential in Wildlife

Xin Hou, Jing Wang, Da-Xi Wang, Ye Chen, Xinxin Li, Wei-Chen Wu, Shi-Jia Le, Shi-Qiang Mei, Han-Lin Liu, Yun Feng, Lifen Yang, Peibo Shi, Zi-Rui Ren, Lin Yang, Haijian He, , Mǎng Shī

The paper analyzes wildlife infectomes to identify zoonotic pathogens, finding 62 novel pathogens including a new coronavirus genus and highlighting high pathogen diversity in Carnivora and Rodentia.

bioRxiv · Jan 9, 2025 · PreprintMicrobiology