Author

Shir Katz

Weizmann Institute of Science

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Biology Disciplines

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Systems Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Organism:mouse· 1 Approach:statistical model· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Avishai GavishiD· 1 shared Benny ChainiD· 1 shared Nir FriedmaniD· 1 shared Shlomit Reich-ZeligeriD· 1 shared Tomer‐Meir SalameiD· 1 shared Yaron E. AntebiiD· 1 shared

Activity by Year

2022-2022 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperSystems Biology

Avishai GavishORCID

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1 paper

Recent·Most cited

From pseudotime to true dynamics: reconstructing a real-time axis for T cells differentiation

Avishai Gavish, Benny Chain, Tomer‐Meir Salame, Yaron E. Antebi, Shir Katz, Shlomit Reich-Zeliger, Nir Friedman

The paper introduces a method to reconstruct real-time dynamics from single-cell trajectories by estimating cell density, flux, division, and apoptosis rates, validated on mouse thymus data.

bioRxiv · Jun 9, 2022 · PreprintSystems Biology