Joint sequence & chromatin neural networks characterize the differential abilities of Forkhead transcription factors to engage inaccessible chromatin
Sonny Arora, Jianyu Yang, Tomohiko Akiyama, Daniela Q. James, Alexis Morrissey, Thomas R. Blanda, Nitika Badjatia, William Lai, Minoru S.H. Ko, B. Franklin Pugh, Shaun Mahony
The paper investigates how sequence preferences and chromatin environments influence Fox TF binding using neural networks and mouse stem cells.
bioRxiv · Oct 6, 2023 · PreprintGenomics