Visualization and review of reads alignment on the graphical pan-genome with VAG
Fangping Li, Haifei Hu, Zitong Xiao, Jingming Wang, Jieying Liu, Deshu Zhao, Yu Fu, Yijun Wang, Xue Yuan, Suhong Bu, Xiaofan Zhou, Junliang Zhao, Shaokui Wang
The paper introduces VAG, a tool for visualizing and analyzing read alignments on graph pangenomes, and demonstrates its application in identifying genetic variations in rice and other species.
bioRxiv · Jan 20, 2023 · PreprintBioinformatics