Author

Valerio Pereno

University of Oxford

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Assay:DNA methylation· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Aaron W. KollaschiD· 2 shared Carla GrecoiD· 2 shared Emma BoltoniD· 2 shared Glen-Oliver F. GowersiD· 2 shared Gus Minto-Cowcher· 2 shared Keith Y K KamiD· 2 shared Marcus H. Y. LeungiD· 2 shared Matthew H. BakalariD· 2 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Aaron W. KollaschORCID

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2 papers

Recent·Most cited

Designing AI-programmable therapeutics with the EDEN family of foundation models

Geraldene Munsamy, Gavin Ayres, Carla Greco, Keith Y K Kam, Gus Minto-Cowcher, John St John, Tanggis Bohnuud, Matthew H. Bakalar, William Chow, Robert J. Pecoraro, Marcelo D. T. Torres, Aaron W. Kollasch, Marcus H. Y. Leung, Hassan Sirelkhatim, Francesco Farina, , Philipp Lorenz

This paper introduces the EDEN family of foundation models for AI-programmable therapeutic design, demonstrating their ability to generate functional gene insertions, antibiotic peptides, and synthetic microbiomes.

bioRxiv · Feb 9, 2026 · PreprintGenomics

Breaking Through Biology's Data Wall: Expanding the Known Tree of Life by Over 10x using a Global Biodiscovery Pipeline

Oliver Vince, Phoebe Oldach, Valerio Pereno, Marcus H. Y. Leung, Carla Greco, Gus Minto-Cowcher, Saif Ur-Rehman, Keith Y K Kam, William Chow, Emma Bolton, Bupe Ruhama Mwambingu, Nadine L Greenhalgh, Ineke E. Knot, Leif Christoffersen, Marlon Clark, , Glen-Oliver F. Gowers

The paper introduces BaseData, a new biological sequence database that expands known protein diversity by over 10x using a global biodiscovery pipeline.

bioRxiv · Jun 11, 2025 · PreprintGenomics