Research on crop phenotype prediction using SNP context and whole-genome feature embedding
Huan Li, Yunpeng Cui, Tan Sun, Ting Wang, Zhen Chen, Chao Wang, Wenbo Bian, Juan Liu, Mo Wang, Li Chen, Jinming Wu, Jie Huang
This paper introduces SNP-context and whole-genome feature embeddings using DNABERT-2 for crop phenotype prediction, showing improved accuracy over traditional methods for traits with varying heritability.
bioRxiv · Apr 8, 2025 · PreprintGenetics