Chromatin-enriched RNAs mark active and repressive cis-regulation: an analysis of nuclear RNA-seq
Xiangying Sun, Zhezhen Wang, Johnathon M. Hall, Carlos Perez-Cervantes, Alexander J. Ruthenburg, Ivan P. G. Moskowitz, Michael Gribskov, Xinan Holly Yang
The paper introduces a new computational pipeline, Tuxedo, for analyzing nuclear RNA-seq data, which identifies chromatin-enriched RNAs (cheRNAs) and characterizes their cis-regulatory roles.
PLoS Computational Biology · Feb 10, 2020Peer-reviewedGenomics