Author

Xinpei Ci

University Health Network

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Assay:scATAC-seq· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Federico GaitiiD· 1 shared Gregory W. SchwartziD· 1 shared Ho Seok LeeiD· 1 shared Housheng Hansen HeiD· 1 shared Lin Yang· 1 shared Mathieu LupieniD· 1 shared Pathum KossinnaiD· 1 shared Shalini Bahl· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Federico GaitiORCID

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1 paper

Recent·Most cited

iSHARC: Integrating scMultiome data for heterogeneity and regulatory analysis in cancer

Yong Zeng, Shalini Bahl, Xu Xi, Xinpei Ci, Tina Keshavarzian, Lin Yang, Ho Seok Lee, Pathum Kossinna, Federico Gaiti, Gregory W. Schwartz, Housheng Hansen He, Mathieu Lupien

iSHARC is a pipeline for analyzing scMultiome data, enabling quality control, integration, clustering, annotation, and regulatory analysis in cancer studies.

bioRxiv · Apr 28, 2025 · PreprintBioinformatics