Author

Xu Xi

University Health NetworkORCID 0009-0004-2567-616XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Assay:scATAC-seq· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Federico GaitiiD· 1 shared Gregory W. SchwartziD· 1 shared Ho Seok LeeiD· 1 shared Housheng Hansen HeiD· 1 shared Lin Yang· 1 shared Mathieu LupieniD· 1 shared Pathum KossinnaiD· 1 shared Shalini Bahl· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Federico GaitiORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintApr 28, 2025

iSHARC: Integrating scMultiome data for heterogeneity and regulatory analysis in cancer

Yong Zeng, Shalini Bahl, Xu Xi…·Mathieu Lupien

iSHARC is a pipeline for analyzing scMultiome data, enabling quality control, integration, clustering, annotation, and regulatory analysis in cancer studies.

DOI 10.1101/2025.04.28.651068

scRNA-seqscATAC-seq

𝕏 PostBluesky