Author

Yujie Liu

Fudan University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioengineering· 1 Genomics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 1 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:large language model· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Boyang Li· 1 shared C.T. LiuiD· 1 shared Dongzhan Zhou· 1 shared Edward A. MeadiD· 1 shared Gang FangiD· 1 shared Gintaras Y. DeikusiD· 1 shared Hamid Alinejad-RoknyiD· 1 shared Han JiangiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioengineering

Boyang Li

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Root hair lifespan is antagonistically controlled by autophagy and programmed cell death

Qiang‐Nan Feng, Shihao Zhu, Xinchao Wang, Yujie Liu, Jierui Zhao, Yasin Dagdas, Moritz K. Nowack

The paper shows that autophagy extends root hair lifespan, while its loss triggers cell death via a gene network involving ANAC046 and ANAC087.

Nature Plants · May 6, 2026Peer-reviewedPlant Biology

Critical assessment of intratumor and low-biomass microbiome using long-read sequencing

Yanchun Zhang, Edward A. Mead, Mi Ni, Magdalena Ksiezarek, Yujie Liu, Lei Cao, Hao Chen, Yu Fan, Wanjin Qiao, Yangmei Li, Laura Zuluaga, Gintaras Y. Deikus, Robert Sebra, Rachel Brody, Raymund L.M. Yong, , Gang Fang

The paper assesses low-biomass microbiome detection in tissues using long-read sequencing, finding that genuine microbiome signals are limited to tissues with natural microbial exposure.

bioRxiv · Feb 12, 2026 · PreprintGenomics

Execution-aware agent harness for accessible and responsible synthetic biology automation

Yuan Gao, Lizhou Luo, Yujie Liu, Lizhou Luo, Jianzhi Zhang, Wenzhuo Li, Yunquan Lan, Yanjing Wang, Yingyi Li, Han Jiang, Yongcan Chen, Nan (Dorothy) Zhang, Tessa Alexanian, Lucas Boldrini, Xiao Yi, , Tong Si

LabscriptAI translates natural language into robot scripts for synthetic biology, achieving high simulation accuracy and enabling secure, standardized, and traceable lab automation.

bioRxiv · Sep 30, 2025 · PreprintBioengineering