Deep-learning-based flexible pipeline for segmenting and tracking cells in 3D image time series for whole brain imaging
Chentao Wen, Takuya Miura, Venkatakaushik Voleti, Kazushi Yamaguchi, Motosuke Tsutsumi, Kei Yamamoto, Kohei Otomo, Yukako Fujie, Takayuki Teramoto, Takeshi Ishihara, Kazuhiro Aoki, Tomomi Nemoto, Elizabeth M. C. Hillman, Koutarou D. Kimura
The paper develops a deep-learning-based pipeline for segmenting and tracking cells in 3D brain imaging data, achieving high accuracy across different conditions and datasets.
eLife · Mar 29, 2021Peer-reviewedBioinformatics