Author

Yun Zhu

Shanghai Jiao Tong University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Bioinformatics· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Research Focus:GWAS / association mapping· 1 Organism:human· 1 Assay:imaging· 1

Frequent Co-Authors

Bo Ying· 1 shared Chaoyong James YangiD· 1 shared Daniel Fernandez· 1 shared Fangfang XuiD· 1 shared Jia Tao SongiD· 1 shared Jiexing Wu· 1 shared Jun S. LiuiD· 1 shared Junwen WangiD· 1 shared

Activity by Year

2015-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Bo Ying

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2 papers

Recent·Most cited

Spaceland: Histology-Guided Reconstruction of High-Resolution Whole-Organ 3D Molecular Atlases from Sparse Spatial Transcriptomics

Fangfang Xu, Zhenfeng Zhuang, Yun Zhu, Bo Ying, Naiqiao Hou, Weiping Lin, Liansheng Wang, Chaoyong James Yang, Jia Tao Song

Spaceland reconstructs high-resolution 3D molecular atlases from sparse spatial transcriptomics and histology, improving resolution and accuracy across multiple biological contexts.

bioRxiv · Jul 27, 2026 · PreprintBioinformatics

Exploring functional variation affecting ceRNA regulation in humans

Mulin Jun Li, Jiexing Wu, Peng Jiang, Wei Li, Yun Zhu, Daniel Fernandez, Russell J. H. Ryan, Yiwen Chen, Junwen Wang, Jun S. Liu, X. Shirley Liu

The paper identifies genetic variations affecting ceRNA regulation by analyzing RNA-seq data and GWAS results, revealing new regulatory mechanisms and disease associations.

bioRxiv · Mar 22, 2015 · PreprintGenetics