Author

Zan Koenig

Broad Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Assay:DNA methylation· 2 Research Focus:variant effect prediction· 2 Approach:benchmark study· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Elizabeth G. AtkinsoniD· 3 shared Mary T. Yohannes· 3 shared Alicia R. MartiniD· 2 shared Benjamin M. NealeiD· 2 shared Harrison BrandiD· 2 shared Julia K. GoodrichiD· 2 shared Katherine R. ChaoiD· 2 shared Mark J. DalyiD· 2 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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3 shared papersGenomics

Elizabeth G. AtkinsonORCID

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3 papers

Recent·Most cited

A harmonized public resource of deeply sequenced diverse human genomes

Zan Koenig, Mary T. Yohannes, Lethukuthula L. Nkambule, Xuefang Zhao, Julia K. Goodrich, Heesu Ally Kim, Michael W. Wilson, Grace Tiao, Stephanie P. Hao, Nareh Sahakian, Katherine R. Chao, Mark Walker, Yunfei Lyu, Heidi L. Rehm, Benjamin M. Neale, , Alicia R. Martin

The paper harmonizes diverse human genomes from multiple datasets to create a new reference panel with improved variant coverage and population structure analysis.

Genome Research · May 1, 2024Peer-reviewedGenomics

A genome-wide mutational constraint map quantified from variation in 76,156 human genomes

Siwei Chen, Laurent C. Francioli, Julia K. Goodrich, Ryan L. Collins, Masahiro Kanai, Qingbo S. Wang, Jessica Alföldi, Nicholas A. Watts, Christopher Vittal, Laura Doyle Gauthier, Timothy Poterba, Michael W. Wilson, Yekaterina Tarasova, William Phu, Riley H. Grant, , David B. Goldstein

Rare-variant depletion in 1kb windows of 76,156 gnomAD genomes, versus feature-adjusted mutation expectations, marks regulatory elements and outperforms seven alternative scores at flagging functional non-coding variants.

Nature · Dec 6, 2023Peer-reviewedGenetics✦ In-depth digest

Genetic structure correlates with ethnolinguistic diversity in eastern and southern Africa

Elizabeth G. Atkinson, Shareefa Dalvie, Yakov Pichkar, Allan Kalungi, Lerato Majara, Anne Stevenson, Tamrat Abebe, Dickens Howard Akena, Melkam Alemayehu Kebede, Fred K. Ashaba, Lukoye Atwoli, Mark Baker, Lori Beth Chibnik, Nicole Creanza, Mark J. Daly, , NeuroGAP-Psychosis Study Team

This study examines genetic structure in African populations using ethnolinguistic data, finding that language classifications better capture genetic variation than geography alone.

The American Journal of Human Genetics · Sep 1, 2022Peer-reviewedGenomics