Author

Oliver Snow

Simon Fraser UniversityORCID 0000-0001-5051-1771Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Martin EsteriD· 2 shared Dujian Ding· 1 shared Hossein Sharifi-NoghabiiD· 1 shared Jialin Lu· 1 shared Mark Lee· 1 shared Olga I. ZolotarevaiD· 1 shared Sahand KhakabimamaghaniiD· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 13 mutual co-author links

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2 shared papersBioinformatics

Martin EsterORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintMay 2, 2020

BDKANN - Biological Domain Knowledge-based Artificial Neural Network for drug response prediction

Oliver Snow, Hossein Sharifi-Noghabi, Jialin Lu…·Martin Ester

This paper introduces BDKANN, a neural network using biological knowledge to predict cancer drug response from gene expression data, achieving low error and interpretable results.

8 citations

bulk RNA-seqdeep learning

𝕏 PostBluesky

BioinformaticsPLoS Computational BiologyPeer-reviewedNov 11, 2019

Uncovering the subtype-specific temporal order of cancer pathway dysregulation

Sahand Khakabimamaghani, Dujian Ding, Oliver Snow, Martin Ester

This paper introduces a mathematical model to identify subtype-specific temporal order of cancer pathway dysregulation and demonstrates its effectiveness on glioblastoma and colorectal adenocarcinoma data.

6 citations

humanstatistical model

𝕏 PostBluesky