Author
Ilan Shomorony
University of Illinois Urbana-ChampaignORCID 0000-0001-5077-2269Unclaimed ORCID profile · follow to get notified of new preprints
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Biology Disciplines
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2017-2022 · peak 2/yrCo-Author Collaboration Network
10 top collaborators · 27 mutual co-author links6 papers
Recent·Most cited
- BioinformaticsBioinformaticsPeer-reviewed
JIND: Joint Integration and Discrimination for Automated Single-Cell Annotation
Mohit Goyal, Guillermo Serrano, Josepmaria Argemí…·Idoia Ochoa
JIND improves automated cell-type annotation in single-cell RNA-seq by learning a latent space for reliable classification and batch alignment without retraining.
11 citations - BioinformaticsPatternsPeer-reviewed
Spectral Jaccard Similarity: A new approach to estimating pairwise sequence alignments
Tavor Z. Baharav, Govinda M. Kamath, David N. C. Tse, Ilan Shomorony
This paper introduces Spectral Jaccard Similarity, a method to estimate pairwise sequence alignments by addressing k-mer distribution biases, showing improved performance on PacBio reads.
- BioinformaticsbioRxivPreprint
Addition of Genetics to Quantitative MRI Facilitates Earlier Prediction of Dementia: A Non-invasive Alternative to Amyloid Measures
Natalie M. Schenker-Ahmed, Nafisa Bulsara, Lei Yang…·Alzheimer’s Disease Neuroimaging Initiative
This paper develops a model combining polygenic risk scores and quantitative MRI to predict dementia onset up to eight years earlier than traditional methods.
2 citations - BioinformaticsbioRxivPreprint
Unsupervised integration of multimodal dataset identifies novel signatures of health and disease
Ilan Shomorony, Elizabeth T. Cirulli, Lei Huang…·Naisha Shah
The paper integrates multimodal health data to identify novel biomarker signatures for health and disease, showing better predictive power for diabetes and hypertension than traditional biomarkers.
2 citations - BioinformaticsGenome ResearchPeer-reviewed
HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution
Govinda M. Kamath, Ilan Shomorony, Fei Xia…·David N. C. Tse
HINGE improves repeat resolution in long-read genome assembly by distinguishing resolvable from unresolvable repeats, producing more finished assemblies than existing methods.