Author

Saima Sultana Tithi

Virginia TechORCID 0000-0001-5087-0125Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:software / tool· 2 Organism:human· 1 Assay:metagenomics· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1 Assay:whole-exome sequencing· 1

Frequent Co-Authors

David W. EllisoniD· 1 shared Frank O. AylwardiD· 1 shared Gang WuiD· 1 shared Jiyoung LeeiD· 1 shared Li SongiD· 1 shared Liqing ZhangiD· 1 shared Liqing ZhangiD· 1 shared Na MengiD· 1 shared

Activity by Year

2017-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperGenetics

David W. EllisonORCID

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3 papers

Recent·Most cited

GeneticsbioRxivPreprintSep 29, 2021

CoCoRV: a rare variant analysis framework using publicly available genotype summary counts to prioritize germline disease-predisposition genes

Wenan Chen, Shuoguo Wang, Saima Sultana Tithi…·Gang Wu

CoCoRV prioritizes germline disease-predisposition genes by using public genotype summary counts as controls, effectively identifying cancer-predisposition genes in pediatric cancer cohorts.

1 citation

humanwhole-exome sequencing

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BioinformaticsPeerJPeer-reviewedJan 12, 2018

FastViromeExplorer: A Pipeline for Virus and Phage Identification and Abundance Profiling in Metagenomics Data

Saima Sultana Tithi, Frank O. Aylward, Roderick V. Jensen, Liqing Zhang

FastViromeExplorer is a pipeline for quickly identifying and quantifying viruses and phages in metagenomics data with real and simulated data validation.

74 citationstop 2%

metagenomicsexperimental assay

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BioinformaticsbioRxivPreprintOct 10, 2017

Biopipe: A Lightweight System Enabling Comparison of Bioinformatics Tools and Workflows

Saima Sultana Tithi, Jiyoung Lee, Liqing Zhang…·Na Meng

Biopipe simplifies bioinformatics workflow creation and execution, enabling tool comparison through a web interface and automated Docker-based setup.

2 citations

experimental assaysoftware / tool

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