Roderick V. Jensen

This study uses single-cell RNA-sequencing and other omics data to analyze the molecular features of pleural mesothelioma subtypes and identify potential drivers of tumor cell states.

The paper establishes reference samples with high-coverage whole-genome sequencing to create truth sets for somatic mutation and germline variant detection using NGS technologies.

This study evaluates reproducibility and accuracy of cancer mutation detection using whole-genome and whole-exome sequencing across multiple sequencing centers and bioinformatics pipelines.

The paper describes a novel genome assembly method for P. stewartii DC283, revealing plasmid-borne virulence factors and new genomic regions.

FastViromeExplorer is a pipeline for quickly identifying and quantifying viruses and phages in metagenomics data with real and simulated data validation.