Author

Nicholas Bodkin

Northwestern UniversityORCID 0000-0001-5090-9616Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 1 Neuroscience· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Research Focus:gene regulatory network inference· 3 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1

Frequent Co-Authors

Aishwarya RamamurthyiD· 1 shared Carina G BiariD· 1 shared Cesar Azrak· 1 shared Daryll A. VanoveriD· 1 shared Esther YooniD· 1 shared Gemma L. CarvilliD· 1 shared Haichen WangiD· 1 shared Ian A. MellisiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperGenetics

Aishwarya RamamurthyORCID

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3 papers

Recent·Most cited

GeneticsNature CommunicationsPeer-reviewedJul 21, 2026

Analysis of 14q12 microdeletions reveals novel regulatory loci for the neurodevelopmental disorder-related gene, FOXG1

Aishwarya Ramamurthy, Masha D Bandouil, Likhita Aluru…·Gemma L. Carvill

The paper identifies a regulatory region in 14q12 that affects FOXG1 expression and contributes to neurodevelopmental disorders through noncoding structural variants.

DOI 10.1038/s41467-026-75694-2

humanDNA methylation

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Systems BiologybioRxivPreprintAug 14, 2023

Prevalence of and gene regulatory constraints on transcriptional adaptation in single cells

Ian A. Mellis, Nicholas Bodkin, Madeline E. Melzer, Yogesh Goyal

The paper investigates transcriptional adaptation in mammalian cells using computational analysis, mathematical modeling, and machine learning, identifying widespread prevalence and single-cell manifestations of compensatory gene networks.

1 citation

humanscRNA-seq

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NeuroscienceJournal of NeuroinflammationPeer-reviewedJun 20, 2020

Evaluation of M2-like macrophage enrichment after diffuse traumatic brain injury through transient interleukin-4 expression from engineered mesenchymal stromal cells

Syed Faaiz Enam, Sajidur Rahman Kader, Nicholas Bodkin…·Ravi V. Bellamkonda

This study evaluates the effect of transient IL-4 expression from engineered MSCs on M2-like macrophage enrichment after TBI, finding no improvement in functional or histological outcomes.

57 citationstop 4%

mousebulk RNA-seq

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