Author

David R. Cooper

University of VirginiaORCID 0000-0001-5240-9789Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:long-read sequencing· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Ana FiszbeiniD· 1 shared Ben T. JordaniD· 1 shared Dmitry KorkiniD· 1 shared Emily F. WattsiD· 1 shared Gloria SheynkmaniD· 1 shared Jamie SaquingiD· 1 shared Mayank MuraliiD· 1 shared Peter J. CastaldiiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Ana FiszbeinORCID

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1 paper

Recent·Most cited

GenomicsGenome ResearchPeer-reviewedApr 1, 2025

Biosurfer for systematic tracking of regulatory mechanisms leading to protein isoform diversity

Mayank Murali, Jamie Saquing, Senbao Lu…·Gloria Sheynkman

Biosurfer identifies sources of protein isoform diversity by analyzing long-read RNA-seq data, revealing common mechanisms like alternative transcription start sites and 'ragged codons'.

7 citations

humanlong-read sequencing

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