Author

J. H. M. Stassen

University of SheffieldORCID 0000-0001-5483-325XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:development & morphogenesis· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Assay:metagenomics· 1

Frequent Co-Authors

Adam Hannan ParkeriD· 1 shared Aikaterini SymeonidiiD· 1 shared Bas J. FroneniD· 1 shared E.H. NijhuisiD· 1 shared Frank M. JohannesiD· 1 shared Gerard Arjen de GrootiD· 1 shared Jurriaan ToniD· 1 shared Lisa M. SmithiD· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperEvolutionary Biology

Adam Hannan ParkerORCID

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2 papers

Recent·Most cited

Multi-generational biotic stress increases the rate of spontaneous epimutations in a ROS1-dependent manner

Zhilin Zhang, Adam Hannan Parker, Aikaterini Symeonidi, Samuel W. Wilkinson, J. H. M. Stassen, Lisa M. Smith, Jurriaan Ton, Frank M. Johannes

The paper shows that multi-generational exposure to biotic stress increases epimutation rates in Arabidopsis, mediated by ROS1, affecting low-methylation genes.

bioRxiv · Sep 19, 2024 · PreprintEvolutionary Biology

PIMENTA: PIpeline for MEtabarcoding through Nanopore Technology used for Authentication

Valerie van der Vorst, Marijke Thijssen, Bas J. Fronen, Gerard Arjen de Groot, Margot A.M. Maathuis, E.H. Nijhuis, Marcel Polling, Joost Stassen, Marleen M. Voorhuijzen, R.G. Jak

PIMENTA is a Nanopore DNA metabarcoding pipeline that improves taxonomic identification accuracy and efficiency through optimized processing and parallelization.

bioRxiv · Feb 14, 2024 · PreprintBioinformatics