Author

Deepashree Venkatesh Prasad

Alex's Lemonade Stand FoundationORCID 0000-0001-5756-4083Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:CITE-seq· 1 Research Focus:database / resource· 1 Research Focus:dimensionality reduction· 1 Approach:experimental assay· 1 Organism:human· 1

Frequent Co-Authors

Allegra G. HawkinsiD· 1 shared Arkadii Yakovets· 1 shared Avrohom M. Gottlieb· 1 shared Casey S. GreeneiD· 1 shared Chanté J. BethelliD· 1 shared David S. MejiaiD· 1 shared Jaclyn TaroniiD· 1 shared Jennifer O’Malley· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Allegra G. HawkinsORCID

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1 paper

Recent·Most cited

BioinformaticsCell GenomicsPeer-reviewedJun 24, 2026

The Single-cell Pediatric Cancer Atlas: Data portal and open-source tools for single-cell transcriptomics of pediatric tumors

Allegra G. Hawkins, Joshua A. Shapiro, Stephanie J. Spielman…·Jaclyn Taroni

The paper introduces a data portal and open-source tools for single-cell transcriptomics of pediatric tumors, providing uniformly processed RNA-seq data and metadata from over 700 samples across 55 cancer types.

18 citationstop 1%

humanscRNA-seq

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