Filip Stefaniak

DEGRONOPEDIA provides a web server for analyzing degron motifs across seven model organisms, integrating sequence, structure, and modification data to support degron research.

The paper develops SIFt-based machine learning models to predict RNA-ligand binding and provides a benchmark dataset for virtual screening.

The paper introduces fingeRNAt, a tool for detecting non-covalent interactions in nucleic acid-ligand complexes and presents its applications for high-throughput analysis and similarity measurement.

AnnapuRNA is a scoring function for predicting RNA-small molecule interactions, outperforming existing tools by using statistical data from experimental RNA-ligand complexes.