Author

Ankita Roychoudhury

Northwestern UniversityORCID 0000-0001-5873-9535Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:E. coli· 2 Approach:statistical model· 2 Approach:Bayesian inference· 1 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Assay:metabolomics· 1 Research Focus:software / tool· 1 Organism:yeast· 1

Frequent Co-Authors

David PincusiD· 1 shared Madhav ManiiD· 1 shared Manisha KapasiawalaiD· 1 shared Matthew HainesiD· 1 shared Paul S. FreemontiD· 1 shared Richard M. MurrayiD· 1 shared William PooleiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 11 mutual co-author links

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1 shared paperCell Biology

David PincusORCID

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2 papers

Recent·Most cited

Cell BiologybioRxivPreprintAug 21, 2026

A Statistical Approach to Cellular Resource Allocation Models

Ankita Roychoudhury, David Pincus, Madhav Mani

The paper uses statistical analysis to uncover growth tradeoffs in E. coli and S. pombe by identifying gene sectors and modeling transcription-translation constraints.

1 citation

E. coliyeast

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Synthetic BiologybioRxivPreprintJun 20, 2025

Metabolomics-informed coarse-grained model enables prediction of cell-free protein expression dynamics

William Poole, Manisha Kapasiawala, Ankita Roychoudhury…·Richard M. Murray

The paper develops a coarse-grained model of cell-free protein synthesis using metabolomics data and Bayesian inference to predict expression dynamics across novel conditions.

2 citations

E. colimetabolomics

𝕏 PostBluesky