Author

Nelson L. Michael

Walter Reed Army Institute of ResearchORCID 0000-0001-5882-5548Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Immunology· 2 Microbiology· 2 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 5 Research Focus:differential expression· 3 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Approach:deep learning· 2 Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 2 Assay:scRNA-seq· 2

Frequent Co-Authors

Rasmi ThomasiD· 4 shared Aviva GeretziD· 3 shared Meera BoseiD· 3 shared Merlin Lee RobbiD· 3 shared Philip K. EhrenbergiD· 3 shared Sandhya VasaniD· 3 shared Sodsai TovanabutraiD· 3 shared Carlo SacdalaniD· 2 shared

Activity by Year

2021-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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4 shared papersImmunology

Rasmi ThomasORCID

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

ImmunologybioRxivPreprintAug 18, 2026

Unique CD8+ T Cell Populations Expand during ART and Predict Delayed HIV-1 Rebound

Jie Wang, Gautam Kundu, Philip K. Ehrenberg…·the RV254 study team

The paper identifies a unique CD8+ T cell population that expands during ART and predicts delayed HIV-1 rebound.

DOI 10.64898/2026.08.11.743993

𝕏 PostBluesky

ImmunologyNature CommunicationsPeer-reviewedMay 29, 2025

Single-cell analyses reveal that monocyte gene expression profiles influence HIV-1 reservoir size in acutely treated cohorts

Philip K. Ehrenberg, Aviva Geretz, Meta Volčič…·Rasmi Thomas

The paper uses scRNA-seq to show that monocyte IL1B expression inversely correlates with HIV-1 reservoir size in ART-treated individuals.

13 citationstop 3%

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MicrobiologybioRxivPreprintJan 21, 2025

Distinct memory CD4 subset tropism of two CCR5-tropic HIV-1 in a rapid progressor

Manukumar Honnayakanahalli Marichannegowda, Yasmine Farah, Meera Bose…·Hongshuo Song

The paper shows that two CCR5-tropic HIV-1 variants preferentially infect distinct memory CD4+ T cell subsets in vivo.

DOI 10.1101/2025.01.21.634053

humanexperimental assay

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MicrobiologyEBioMedicinePeer-reviewedOct 19, 2024

Transmission of highly virulent CXCR4 tropic HIV-1 through the mucosal route in an individual with a wild-type CCR5 genotype

Manukumar Honnayakanahalli Marichannegowda, Saini Setua, Meera Bose…·Hongshuo Song

The paper identifies an X4-tropic HIV-1 transmitted/founder virus in a person with wild-type CCR5, showing faster CD4 depletion and resistance to certain bNAbs.

15 citations

humanexperimental assay

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Systems BiologyeLifePeer-reviewedSep 17, 2021

Monocyte-derived transcriptome signature indicates antibody-dependent cellular 1 phagocytosis as the primary mechanism of vaccine-induced protection against HIV-1

Shida Shangguan, Philip K. Ehrenberg, Aviva Geretz…·Rasmi Thomas

The paper identifies a monocyte-derived transcriptome signature linked to antibody-dependent cellular phagocytosis as a correlate of vaccine-induced protection against HIV-1 in clinical trials.

26 citations

humanbulk RNA-seq

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