Author

Shaopeng Gu

The Ohio State UniversityORCID 0000-0001-5938-3972Unclaimed ORCID profile · follow to get notified of new preprints

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Shaopeng Gu1 paper · Sanford Health

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:CITE-seq· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:graph neural network· 1 Organism:human· 1

Frequent Co-Authors

Anjun MaiD· 2 shared Cankun WangiD· 2 shared Qin MaiD· 2 shared Bingqiang LiuiD· 1 shared Dong He XuiD· 1 shared Duolin WangiD· 1 shared Gang XiniD· 1 shared Jingxian LiiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Anjun MaORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintFeb 10, 2026

A multi-agent platform for assessment and improvement of bioinformatics software documentation

Anjun Ma, Shaohong Feng, Shaopeng Gu…·Qin Ma

This paper introduces BioGuider, a multi-agent platform that evaluates and improves bioinformatics software documentation, showing a link between documentation quality and citation frequency.

DOI 10.64898/2026.02.09.704801

experimental assaybenchmarking

𝕏 PostBluesky

BioinformaticsbioRxivPreprintOct 31, 2021

DeepMAPS: Single-cell biological network inference using heterogeneous graph transformer

Anjun Ma, Xiaoying Wang, Cankun Wang…·Qin Ma

DeepMAPS infers biological networks from single-cell multi-omics data using a heterogeneous graph transformer, outperforming existing tools in cell clustering and pathway prediction.

14 citations

𝕏 PostBluesky