Author

Samuel W. Baker

University of PennsylvaniaORCID 0000-0001-6083-1824Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Samuel W. Baker2 papers · Children's Hospital of Philadelphia

Biology Disciplines

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Bioinformatics· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:benchmark study· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:fine-mapping· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Abraham A. ShakediD· 1 shared Alessandra ChesiiD· 1 shared Andrea M. Berrido· 1 shared Andrew D. WellsiD· 1 shared Arupa A. GangulyiD· 1 shared Bao‐Li LozaiD· 1 shared Christopher D. BrowniD· 1 shared Daniel James RaderiD· 1 shared

Activity by Year

2019-2020 · peak 1/yr

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10 top collaborators · 36 mutual co-author links

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1 shared paperGenetics

Abraham A. ShakedORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJul 16, 2020

Bibliome Variant Database: Automated Identification and Annotation of Genetic Variants in Primary Literature

Samuel W. Baker, Arupa A. Ganguly

The paper introduces BVdb, a database of over 1 million human genetic variants mined from primary literature, to aid in variant interpretation by providing quick access to relevant references.

DOI 10.1101/2020.07.16.207688

humanwhole-exome sequencing

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GeneticsThe American Journal of Human GeneticsPeer-reviewedJun 13, 2019

Genetic And Epigenetic Fine Mapping Of Complex Trait Associated Loci In The Human Liver

Minal Çalışkan, Elisabetta Manduchi, H. Shanker Rao…·Christopher D. Brown

The paper fine-maps 77 GWAS loci in the human liver by integrating epigenetic and gene expression data to understand genetic and epigenetic regulation of gene expression.

60 citations

humanbulk RNA-seq

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