Author
Washington University in St. LouisORCID 0000-0001-6118-6409Unclaimed ORCID profile · follow to get notified of new preprints
7 papers
Recent·Most cited
Daniela Weiss, Felix Shaya, Mira Carmeli‐Weissberg…·Ziv Spiegelman
This study shows that Tobamovirus infection in tomato roots causes a trade-off between salicylic acid defense and auxin growth signaling, with SlARF19a playing a key role in root branching suppression.
Christopher Gottschalk, Jordan R. Brock, Ben N. Mansfeld…·Chris D Dardick
The paper improves the genome assembly of two peach doubled haploid varieties using third-generation sequencing and enhances gene and NLR annotations.
Ryan D. Kuster, Zane C Smith, Lauren Whitt…·Christopher Gottschalk
RAGNAROK is a genome annotation pipeline that improves sensitivity, precision, and runtime for plant genomes compared to existing tools.
Ben N. Mansfeld, Shujun Ou, Erik Burchard…·Christopher Gottschalk
The paper reports the genome assembly and annotation of Malus angustifolia, identifies SNPs and structural variants, and explores phylogenetic relationships with Eurasian Malus species.
Ben N. Mansfeld, Alan E. Yocca, Shujun Ou…·Christopher Gottschalk
This paper presents a high-quality, haplotype-resolved genome assembly of Malus fusca and identifies structural variants and a fire blight resistance locus.
Ben N. Mansfeld, Adam Boyher, Jeffrey C. Berry…·Rebecca S Bart
The paper assembles and resolves two haplotypes of a cassava line using multiple sequencing technologies, revealing over 5,000 large structural variants.
Ben N. Mansfeld, Rebecca Grumet
QTLseqr is an R package for NGS-BSA that identifies QTL using QTL-seq and G methods, providing tools for SNP analysis and visualization.