Author

Daniel Mark Fountain

University of OxfordORCID 0000-0001-6227-9930Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:gene regulatory network inference· 2 Assay:ChIP-seq· 1 Approach:deep learning· 1 Organism:human· 1 Organism:mouse· 1 Research Focus:perturbation response prediction· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Julianna O. HaugiD· 2 shared Sarah MayesiD· 2 shared Tatjana Sauka‐SpengleriD· 2 shared Andrew J. PriceiD· 1 shared Fabian Joachim TheisiD· 1 shared Güneş TayloriD· 1 shared Irving T. C. LingiD· 1 shared Ivan Candido-FerreiraiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersDevelopmental Biology

Julianna O. HaugORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Developmental BiologyCellPeer-reviewedMay 12, 2026

RegVelo: gene-regulatory-informed dynamics of single cells

Weixu Wang, Zhiyuan Hu, Philipp Weiler…·Fabian Joachim Theis

RegVelo integrates gene regulatory networks with dynamic modeling to predict cellular changes and perturbations, showing improved performance in cell cycle, hematopoiesis, and pancreatic development datasets.

23 citationstop 1%

zebrafishhuman

𝕏 PostBluesky

Developmental BiologyPLoS BiologyPeer-reviewedOct 17, 2024

Chromatin remodeller Chd7 is developmentally regulated in the neural crest by tissue-specific transcription factors

Ruth M. Williams, Güneş Taylor, Irving T. C. Ling…·Tatjana Sauka‐Spengler

The paper identifies enhancers regulating Chd7 expression in neural crest cells and validates their function in chick embryos, revealing tissue-specific regulation of a chromatin remodeller.

12 citations

ChIP-seqstatistical model

𝕏 PostBluesky