David Goodstein

The paper sequenced genomes of Poaceae sister species to identify metabolic innovations that predate grass evolution, revealing gene duplications linked to starch and lignin biosynthesis.

This study uses genome sequences from Cercis canadensis and Chamaecrista fasciculata to infer legume genome structures and histories, including the timing of whole genome duplications and the ancestral karyotype.

This paper constructs a sorghum pangenome and identifies trait-associated variants to inform climate-aware genome-enabled breeding strategies.

The paper develops genomic resources to improve American chestnut resistance to pathogens through breeding and gene editing.

This paper presents an updated soybean genome assembly (Wm82.a6) and compares it with other assemblies and Fiskeby III, revealing genomic heterogeneity and polymorphisms.

The paper presents de novo genome assemblies and a pan-genome analysis of six cowpea accessions, identifying core and noncore genes and their functional enrichment.

The paper presents version 6 of the Chlamydomonas reinhardtii reference genome, improving assembly quality and revealing structural mutations in laboratory strains.

GENESPACE provides pan-genome annotations to analyze syntenic relationships across diverse eukaryotic genomes, revealing structural variation at multiple biological scales.

This paper presents a chromosome-scale genome assembly and genetic map for greater yam, identifies quantitative trait loci for disease and quality traits, and reveals domestication-related genetic patterns.

The paper updates ePlant to support 15 new plant species and adds new viewers and data sets, including single-cell RNA-seq data for Arabidopsis roots.