Author

Tingting Liu

Northwestern UniversityORCID 0000-0001-6396-7225Unclaimed ORCID profile · follow to get notified of new preprints

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Tingting Liu1 paper

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Assay:Hi-C· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Approach:experimental assay· 1

Frequent Co-Authors

Feng YueiD· 2 shared Hongbo YangiD· 2 shared Jie XuiD· 2 shared Anurag SethiiD· 1 shared Arif O. HarmanciiD· 1 shared Baozhen ZhangiD· 1 shared Chao ChengiD· 1 shared Chongzhi ZangiD· 1 shared

Activity by Year

2020-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersGenomics

Feng YueORCID

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3 papers

Recent·Most cited

GenomicsGenome biologyPeer-reviewedApr 15, 2021

Subtype-specific epigenomic landscape and 3D genome structure in bladder cancer

Tejaswi Iyyanki, Baozhen Zhang, Qixuan Wang…·Feng Yue

This study identifies subtype-specific epigenomic and 3D genome structures in bladder cancer, linking NPAS2 to luminal subtype regulation and clinical outcomes.

58 citations

humanbulk RNA-seq

𝕏 PostBluesky

BioinformaticsbioRxivPreprintNov 30, 2020

3D Genome Contributes to Protein-Protein Interactome

Yi Y. Shi, Song Cao, Mingxuan Zhang…·Guang He

The paper investigates how 3D genome structure influences protein-protein interactions and shows that gene proximity in 3D space correlates with interaction likelihood.

1 citation

protein sequencestatistical model

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GenomicsNature CommunicationsPeer-reviewedJul 29, 2020

An integrative ENCODE resource for cancer genomics

Jing Zhang, Donghoon Lee, Vineet K. Dhiman…·Mark Gerstein

The paper develops a custom ENCODE annotation for cancer genomics, highlighting TF-RBP interactions and network rewiring during oncogenesis, and validates findings using experimental assays.

172 citationstop 1%

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