Author

Tapfumanei Mashe

World Health Organization - ZimbabweORCID 0000-0001-6481-4095Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 3 Organism:bacteria (other)· 2 Research Focus:phylogenetics / evolution· 2 Approach:statistical model· 2 Research Focus:database / resource· 1 Approach:experimental assay· 1 Approach:simulation· 1 Organism:virus· 1

Frequent Co-Authors

Robert A. KingsleyiD· 2 shared Aamer IkramiD· 1 shared Abay SisayiD· 1 shared Abraham AseffaiD· 1 shared Afreenish AmiriD· 1 shared Alexander DiltheyiD· 1 shared Ali H. Abbas· 1 shared Andreas BergthaleriD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersMicrobiology

Robert A. KingsleyORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

BioinformaticsNature MethodsPeer-reviewedFeb 9, 2026

Addressing pandemic-wide systematic errors in the SARS-CoV-2 phylogeny

Martin Hunt, Angie S. Hinrichs, Daniel Anderson…·Djin-Ye Oh

The paper reprocesses SARS-CoV-2 genomic data to correct systematic errors in phylogenies using a novel assembly tool, resulting in a cleaner global tree of 4.47 million samples.

19 citationstop 1%

viruswhole-genome sequencing

𝕏 PostBluesky

MicrobiologyGenome MedicinePeer-reviewedMay 9, 2025

The TyphiNET data visualisation dashboard: Unlocking Salmonella Typhi genomics data to support public health

Zoe A. Dyson, Louise Cerdeira, Vandana Sharma…·Jackie Wright

The paper introduces TyphiNET, a dashboard for exploring Typhi genomics data to support public health decisions on antimicrobial resistance and vaccine implementation.

13 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

GenomicsbioRxivPreprintSep 1, 2022

Population structure and evolution of Salmonella enterica serotype Typhi in Zimbabwe before a typhoid conjugate vaccine immunization campaign

Gaetan J. A. Thilliez, Tapfumanei Mashe, Blessmore Vimbai Chaibva…·Marthie Magdaleen Ehlers

The paper analyzes the population structure and evolution of Salmonella enterica serotype Typhi in Zimbabwe before a typhoid vaccine campaign, identifying dominant resistant genotypes and their AMR mechanisms.

4 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky