Author

Homère J. Alves Monteiro

IfremerORCID 0000-0001-6801-7237Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

Anderson B. MayfieldiD· 1 shared Ann C. AnderseniD· 1 shared Arnaud TanguyiD· 1 shared Bassem AllamiD· 1 shared Benoit Salaun· 1 shared Bernard BilloudiD· 1 shared Bruno Lapeyre· 1 shared Chloé BrahmiiD· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperGenomics

Anderson B. MayfieldORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJun 8, 2026

DipSkmer: Reference-free population genomics with diploid genome skims

Eduardo Charvel, Homère J. Alves Monteiro, Siavash Mirarab, Vineet Bafna

DipSkmer improves population genomics by accurately estimating genetic diversity in diploid organisms using low-coverage genome skims, outperforming existing methods.

DOI 10.64898/2026.06.05.730460

whole-genome sequencingstatistical model

𝕏 PostBluesky

GenomicsbioRxivPreprintJun 26, 2022

Chromosomal assembly of the flat oyster (Ostrea edulis L.) genome as a new genetic ressource for aquaculture

Isabelle Boutet, Homère J. Alves Monteiro, Lyam Baudry…·Arnaud Tanguy

The paper presents a chromosome-level genome assembly for the European flat oyster, providing insights into its genetics and potential for aquaculture improvement.

2 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

GenomicsbioRxivPreprintDec 10, 2018

Identifying conserved molecular mechanisms of thermo-acclimation in symbiotic organisms

Homère J. Alves Monteiro, Chloé Brahmi, Anderson B. Mayfield…·Jérémy Le Luyer

The paper identifies conserved molecular mechanisms of thermo-acclimation in symbiotic organisms by analyzing gene expression responses to temperature changes in giant clams and their dinoflagellate symbionts.

DOI 10.1101/492702

bulk RNA-seqstatistical model

𝕏 PostBluesky