Author
The University of Texas at AustinORCID 0000-0001-6871-7540Unclaimed ORCID profile · follow to get notified of new preprints
6 papers
Recent·Most cited
Kimonas Provatas, Guliang Wang, Nikol Chantzi…·Karen M. Vásquez
HSeeker identifies and scores H-DNA-forming sequences using a three-part algorithm, providing genomic coordinates and stability scores for further analysis.
Van Huynh, Guliang Wang, Anirban Mukherjee, Karen M. Vásquez
This study shows HMGB1 helps ovarian cancer cells resist cisplatin, and inhibiting HMGB1 makes these cells more sensitive to cisplatin treatment.
Georgios Megalovasilis, Eleftherios Bochalis, Michail Patsakis…·Ilias Georgakopoulos‐Soares
The paper characterizes Z-DNA dynamics across different lineages using ZSeeker, finding lineage-specific enrichment and depletion patterns in cellular and viral genomes.
Spyros Zaranikas, Georgios Megalovasilis, Kimonas Provatas…·Ilias Georgakopoulos Soares
ZSeekerDB catalogs Z-nucleic acid sequences across organismal genomes, enabling cross-species analysis of their distribution and evolutionary significance.
Guliang Wang, Ioannis Mouratidis, Kimonas Provatas…·Karen M. Vásquez
ZSeeker detects potential Z-DNA-forming sequences in genomes with improved accuracy and accessibility through a Python package and web interface.
Nikol Chantzi, Camille M. Moeckel, Candace S. Y. Chan…·Ilias Georgakopoulos‐Soares
The paper analyzes inverted repeats across 118,065 genomes to study their distribution, frequency, and functional roles in genomic instability and evolution.