Author

Satoshi Naito

Hokkaido UniversityORCID 0000-0001-7006-5609Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Genomics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:Arabidopsis· 2 Research Focus:database / resource· 2 Research Focus:differential expression· 2 Assay:DNA methylation· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Assay:proteomics· 2

Frequent Co-Authors

Hitoshi OnouchiiD· 4 shared Hiro TakahashiiD· 3 shared Taichiro Motomura· 3 shared Yui YamashitaiD· 3 shared Anna Takahashi· 2 shared Atsushi Kaido· 2 shared Kenji SatouiD· 2 shared Noriya Hayashi· 2 shared

Activity by Year

2020-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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4 shared papersBioinformatics

Hitoshi OnouchiORCID

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4 papers

Recent·Most cited

Plant BiologybioRxivPreprintNov 2, 2026

Putrescine-responsive post-transcriptional feedback regulation of Arabidopsis ADC2 mediated by 5'-UTR elements

Yuta Hiragori, Miharu Yasumuro, Taihei Karino…·Hitoshi Onouchi

This study identifies Putrescine-responsive feedback regulation of ADC2 in Arabidopsis mediated by 5'-UTR elements, showing translational repression and its role in Put homeostasis.

DOI 10.64898/2026.10.31.763274

Arabidopsisproteomics

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GenomicsPlant Molecular BiologyPeer-reviewedAug 31, 2022

Genome-wide identification of Arabidopsis non-AUG-initiated upstream ORFs with evolutionarily conserved regulatory sequences that control protein expression levels

Yuta Hiragori, Hiro Takahashi, Taihei Karino…·Hitoshi Onouchi

The paper identifies four novel non-AUG-initiated upstream ORFs in Arabidopsis that regulate protein expression levels through conserved sequences.

13 citations

Arabidopsisproteomics

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BioinformaticsScientific ReportsPeer-reviewedOct 1, 2020

Exhaustive identification of conserved upstream open reading frames with potential translational regulatory functions from animal genomes

Hiro Takahashi, Shido Miyaki, Hitoshi Onouchi…·Motoyuki Itoh

The paper identifies conserved upstream open reading frames (uORFs) in animal genomes and finds seven novel regulatory uORFs that repress main ORF translation.

9 citations

humanmouse

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BioinformaticsBMC GenomicsPeer-reviewedMar 30, 2020

Comprehensive genome-wide identification of angiosperm upstream ORFs with peptide sequences conserved in various taxonomic ranges using a novel pipeline, ESUCA

Hiro Takahashi, Noriya Hayashi, Yuta Hiragori…·Hitoshi Onouchi

The paper introduces a pipeline called ESUCA to identify conserved upstream ORFs (CPuORFs) across multiple plant species and finds that many of these CPuORFs are functionally conserved.

17 citations

plant (other)DNA methylation

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