Elsa Rousseau

PhaLP 2.0 enhances a phage lysin database by integrating metagenomic data and introducing SUBLYME, a machine learning tool that identifies and classifies lysins with high accuracy.

Empathi improves phage protein function annotation by using hierarchical embeddings, outperforming homology-based methods and increasing annotated protein families.

SPAED improves domain segmentation in phage endolysins using AlphaFold's PAE matrix, achieving higher accuracy than Chainsaw.