Author

Renaud Vitalis

Centre de Coopération Internationale en Recherche Agronomique pour le DéveloppementORCID 0000-0001-7096-3089Unclaimed ORCID profile · follow to get notified of new preprints

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Renaud Vitalis1 paper

Biology Disciplines

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Evolutionary Biology· 4 Genetics· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 5 Approach:statistical model· 4 Research Focus:chromatin & epigenetic regulation· 2 Organism:Drosophila· 2 Research Focus:gene regulatory network inference· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:development & morphogenesis· 1

Frequent Co-Authors

Mathieu GautieriD· 5 shared Marta Coronado‐ZamoraiD· 2 shared Alan O. BerglandiD· 1 shared Alejandro Sánchez‐GraciaiD· 1 shared Aleksandra PatenkovićiD· 1 shared Alexander Klassmann· 1 shared Amanda Glaser‐SchmittiD· 1 shared Antonio BarbadillaiD· 1 shared

Activity by Year

2016-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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5 shared papersEvolutionary Biology

Mathieu GautierORCID

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5 papers

Recent·Most cited

Evolutionary BiologybioRxivPreprintJun 5, 2026

The dynamics of barrier loci recruitment along a continuum of divergence in the context of gene flow

Marjolaine Marie C. Rousselle, Julie Jaquiéry, Jean Peccoud…·Carole M. Smadja

The paper identifies barrier loci across a divergence continuum in pea aphids, showing their clustering in low-recombination regions and enrichment for genes related to host specialization.

DOI 10.64898/2026.01.07.698084

whole-genome sequencingstatistical model

𝕏 PostBluesky

Evolutionary BiologyMolecular Biology and EvolutionPeer-reviewedJul 30, 2025

Footprints of worldwide adaptation in structured populations of D. melanogaster through the expanded DEST 2.0 genomic resource

Joaquin C. B. Nunez, Marta Coronado‐Zamora, Mathieu Gautier…·Alan O. Bergland

The paper uses DEST 2.0 to analyze genetic variation in D. melanogaster across continents and time, identifying adaptation patterns and stable spatial genetic structures.

20 citationstop 1%

Drosophilawhole-genome sequencing

𝕏 PostBluesky

GeneticsbioRxivPreprintNov 22, 2024

Estimating hierarchical F-statistics from Pool-Seq data

Mathieu Gautier, Marta Coronado‐Zamora, Renaud Vitalis

This paper develops unbiased method-of-moments estimators for hierarchical F-statistics tailored for Pool-Seq data and validates them using simulations and real Drosophila data.

6 citations

Drosophilawhole-genome sequencing

𝕏 PostBluesky

Evolutionary BiologybioRxivPreprintJun 9, 2017

Population genomics of bank vole populations reveals associations between immune related genes and the epidemiology of Puumala hantavirus in Sweden

Audrey Rohfritsch, Maxime Galan, Mathieu Gautier…·Nathalie Charbonnel

The paper investigates genetic associations between immune-related genes and Puumala hantavirus epidemiology in bank voles across Sweden.

DOI 10.1101/148163

mousewhole-genome sequencing

𝕏 PostBluesky

Evolutionary BiologybioRxivAug 3, 2016

rehh 2.0: a reimplementation of the R package rehh to detect positive selection from haplotype structure.

Mathieu Gautier, Alexander Klassmann, Renaud Vitalis

The paper upgrades the rehh R package to improve performance for detecting positive selection using haplotype homozygosity statistics on large datasets.

DOI 10.1111/1755-0998.12634

humanwhole-genome sequencing

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