Author

Li Zhang

UNSW SydneyORCID 0000-0001-7506-8278Unclaimed ORCID profile · follow to get notified of new preprints

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Li Zhang30 papers · Johns Hopkins University

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 3 Organism:bacteria (other)· 2 Research Focus:clustering· 2 Approach:statistical model· 2 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Organism:human· 1

Frequent Co-Authors

Ruiting LaniD· 3 shared Ruochen WuiD· 2 shared Alex Chen LuiD· 1 shared Anjaneyaswamy Ravipati· 1 shared Christopher Yau Man Luk· 1 shared Fang LiuiD· 1 shared Joanna M. BiazikiD· 1 shared Michael PayneiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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3 shared papersMicrobiology

Ruiting LanORCID

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3 papers

Recent·Most cited

MicrobiologybioRxivPreprintJul 30, 2026

An integrated genomic framework for Aeromonas genomic species delineation using average nucleotide identify, core-genome phylogeny and digital DNA-DNA hybridization

Alex Chen Lu, Ruochen Wu, Ruiting Lan, Li Zhang

This paper establishes a genomic framework for delineating Aeromonas species using ANI, core-genome phylogeny, and dDDH, identifying 43 genomic species with 95.4% ANI as the threshold.

DOI 10.64898/2026.02.04.703925

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

MicrobiologyAntimicrobial Agents and ChemotherapyPeer-reviewedJul 28, 2026

Multilevel HierCC typing scheme for global genomic epidemiology and antimicrobial resistance surveillance of Campylobacter jejuni

Ruochen Wu, Sandeep Kaur, Michael Payne…·Ruiting Lan

This paper develops a multilevel HierCC typing scheme for global C. jejuni AMR surveillance and epidemiology, identifying resistant clusters and host-specific patterns.

DOI 10.1128/aac.00310-26

humanwhole-genome sequencing

𝕏 PostBluesky

MicrobiologybioRxivPreprintJun 24, 2025

Genomic analysis identifies Campylobacter concisus genomospecies 2 as a novel species and proposes the name Campylobacter oralis

Fang Liu, Siying Chen, Joanna M. Biazik…·Li Zhang

DOI 10.1101/2025.06.24.661227

bacteria (other)whole-genome sequencing

𝕏 PostBluesky