Justin W. Walley

A co-proteomic view of metabolite-specific interactions in the Botrytis cinerea-Arabidopsis pathosystem

The paper uses co-proteomic analysis to study how Arabidopsis and Botrytis cinerea interact during infection, revealing metabolite-specific responses and a novel enzyme involved in detoxification.

Dynamic ASK1 proximity networks uncover SCF-dependent and noncanonical roles in ABA and drought adaptation

This study identifies ASK1 proximity networks under ABA and drought stress, revealing SCF-dependent and noncanonical roles in plant stress adaptation.

Transcription factor binding site divergence across maize inbred lines drives transcriptional and phenotypic variation

The paper identifies TF binding site divergence between maize inbred lines and links it to gene expression and phenotypic variation.

Identification of phenotypic and transcriptomic signatures underpinning maize crown root systems

This study develops an automated phenotyping pipeline for maize crown roots and identifies phenotypic and transcriptomic signatures associated with root system development.

Regulatory architecture of disease resistance in maize revealed by multi-omic systems genetics

The paper integrates multi-omic data to identify regulatory networks underlying disease resistance in maize, revealing a key signaling module involved in resistance to northern leaf blight.

Single-cell proteomics differentiates Arabidopsis root cell types

This study uses single-cell proteomics to identify proteins distinguishing two adjacent cell types in Arabidopsis root cells.

Improved Super-Resolution Ribosome Profiling Revealed Prevalent Translation of Upstream ORFs and Small ORFs in Arabidopsis

The paper improves super-resolution Ribo-seq in Arabidopsis to identify prevalent translation of upstream and small ORFs, revealing new translation events and regulatory mechanisms.

Phosphorylation dynamics in a flg22 induced, heterotrimeric G protein dependent signaling network in Arabidopsis thaliana reveals a candidate PP2A phosphatase involved in AtRGS1 trafficking

The paper identifies ATB as a PP2A phosphatase involved in AtRGS1 trafficking and phosphorylation dynamics during flg22-induced signaling in Arabidopsis.